Detection of NOTCH1 Mutation among Chronic Lymphocytic Leukemia in Sudanese Population
الملخص
Introduction: The proto-oncogene NOTCH1 is frequently mutated in around 10% of patients with chronic lymphocytic leukemia (CLL). The NOTCH signaling pathway in CLL cells serves a role in survival and resistance to apoptosis. The most common mutation of NOTCH1 is C.7544-7545delCT, which accounts for ~80% of all NOTCH1 mutations.
Objectives: The aim of this study was to detect the prevalence the NOTCH1 c.7541_7542delCT mutation in Sudanese patients with B- cell lymphocytic leukemia (B-CLL).
Materials and Methods: A Case-control study was conducted in Khartoum state, Sudan, during the period from April 2017 to April 2018, involved 110 CLL patients. Physical examination, complete blood count, and Immunophenotyping were performed in all patients to confirm the diagnosis. Clinical staging such as Rai and Binet were studied. Blood samples were collected from all participants; DNA was extracted by using ANALYTIKJENA Blood DNA Extraction Kit. Detection of NOTCH1 c.7544_7545delCT mutation was performed using conventional PCR-based amplification refractory mutation system (ARMS) method.
Results: The NOTCH1 c.7544-7545CT mutation was detected by AS-PCR in 46 out of 110 CLL Sudanese patients (41.8%).The distribution of T allele among the cases was 93.6% while the negative cases were 6.4% in cases and controls, No significant association of NOTCH1 mutation with the age and gender. Also the distribution of G allele among cases was 91% while the negative was 9%, in compare to control in which 80.9% was positive and 19.1% were negative with no significant association.
Conclusion: NOTCH1 mutations were frequently detected in B cell CLL Sudanese patients.
Keywords:
المراجع
2. Hallek M. Chronic lymphocytic leukemia: 2017 update on diagnosis, risk stratification, and treatment. Am J Hematol. 2017;92(9):946–65.
3. Fabbri G, Rasi S, Rossi D, Trifonov V, Khiabanian H, Ma J, et al. Analysis of the chronic lymphocytic leukemia coding genome: role of NOTCH1 mutational activation . J Exp Med. 2011; 208(7):1389–401.
4. Puente XS, Pinyol M, Quesada V, Conde L, Ordóñez GR, Villamor N, et al. Europe PMC Funders Group Whole-genome sequencing identifies recurrent mutations in chronic lymphocytic leukaemia. 2012;475(7354):101–5.
5. Rossi D, Rasi S, Fabbri G, Spina V, Fangazio M, Forconi F, et al. Mutations of NOTCH1 are an independent predictor of survival in chronic lymphocytic leukemia. Blood 2012;119(2):521–9. availablewww.ncbi.nlm.nih.gov/pubmed/2207706
6. Quesada V, Conde L, Villamor N, Ordóñez GR, Jares P, Bassaganyas L, et al. Exome sequencing identifies recurrent mutations of the splicing factor SF3B1 gene in chronic lymphocytic leukemia. Nat Genet.2012;44(1):47–52. Available from: http://dx.doi.org/10.1038/ng.1032
7. Wang L, Lawrence MS, Wan Y, Stojanov P, Sougnez C, Stevenson K, et al. SF3B1 and Other Novel Cancer Genes in Chronic Lymphocytic Leukemia. N Engl J Med. 2011;365(26):2497–506.
8. Shahjahani M, Mohammadiasl J, Noroozi F, Seghatoleslami M, Shahrabi S, Saba F, et al. Molecular basis of chronic lymphocytic leukemia diagnosis and prognosis. Cell Oncol. 2015;38(2):93–109.
9. Sportoletti P, Baldoni S, Del Papa B, Aureli P, Dorillo E, Ruggeri L, et al. A revised NOTCH1 mutation frequency still impacts survival while the allele burden predicts early progression in chronic lymphocytic leukemia.Leukemia.2014;28(2):436.
10. Landau D, Wu CJ. CLL : molecular heterogeneity revealed by high-throughput genomics. 2013;1–13.
11. Villamor N, Conde L, Martínez-Trillos A, Cazorla M, Navarro A, Beà S, et al. NOTCH1 mutations identify a genetic subgroup of chronic lymphocytic leukemia patients with high risk of transformation and poor outcome. Leukemia. 2013;27(5):1100–6.
12. Lionetti M, Fabris S, Cutrona G, Agnelli L, Ciardullo C, Matis S, et al. High-throughput sequencing for the identification of NOTCH1 mutations in early stage chronic lymphocytic leukaemia: Biological and clinical implications. Br J Haematol. 2014;165(5):629–39.
13. Baliakas P, Hadzidimitriou A, Sutton LA, Rossi D, Minga E, Villamor N, et al. Recurrent mutations refine prognosis in chronic lymphocytic leukemia. Leukemia. 2015;29(2):329–36.
14. Stilgenbauer S, Schnaiter A, Paschka P, Zenz T, Rossi M, Döhner K, et al. Gene Mutations and Treatment Outcome in Chronic Lymphocytic Leukemia. Blood. 2014;123(21):3247–55.
15. Bilous NI, Abramenko I V., Chumak AA, Dyagil IS, Martina Z V. Detection of notch1 c.7544-7545delct mutation in chronic lymphocytic leukemia using conventional and real- Time polymerase chain reaction. Exp Oncol. 2016 Jun 1;38(2):112–6.
16. Tausch E, Mertens D, Stilgenbauer S. Advances in treating chronic lymphocytic leukemia. F1000Prime Rep. 2014;6(August).
17. Pozzo F, Bittolo T, Arruga F, Bulian P, MacOr P, Tissino E, et al. NOTCH1 mutations associate with low CD20 level in chronic lymphocytic leukemia: Evidence for a NOTCH1 mutationdriven epigenetic dysregulation. Leukemia. 2016;30 (1) :182–9.
18.Nieman PE. of Chronic Randomized. 1975 ; 45 (2):197–203.
19. Binet JL, Auquier A, Dighiero G, Chastang C, Piguet H, Goasguen J, et al. A new prognostic classification of chronic lymphocytic leukemia derived from a multivariate survival analysis. Cancer. 1981;48(1):198–206.
20. Basabaeen AA, Abdelgader EA, Babekir EA, Eltayeb NH, Altayeb OA, Fadul EA, et al. Clinical presentation and hematological profile among young and old chronic lymphocytic leukemia patients in Sudan. BMC Res Notes [Internet]. 2019;12(1):12–7.https://doi.org/10.1186/s13104-019-4239-7
21. Kerr JR, Al-Khattaf A, Barson AJ, Burnie JP. An association between sudden infant death syndrome (SIDS) and Helicobacter pylori infection. Arch Dis Child. 2000;83(5):429–34.
22. Borggrefe T, Oswald F. The Notch signaling pathway: transcriptional regulation at Notch target genes. Cell Mol Life Sci 2009;66:1631–46. https://doi.org/10.1007/ s00018-009-8668-7.
23. Hallek, M. (2019). Chronic lymphocytic leukemia: 2020 update on diagnosis, risk stratification and treatment, annual clinical up dates in hematological malignancies, amj hematol. 2019;94:1266–1287.
24. Shenoy PJ, Malik N, Sinha R, et al. Racial Differences in the Presentation and Outcomes of Chronic Lymphocytic Leukemia and Variants in the United States. Clinical Lymphoma Myeloma & Leukemia. 2011; 11(6): 498-506